The ATC cores currently operate and maintain almost 200 pieces of capital equipment spanning a wide range of disciplines. This list includes all major equipment items across all of our cores in broad categories, and you should be able to link from any equipment item to the core operating it.
- This list does not include equipment available at other nearby institutions as part of the MOU. This is BCM operated equipment only.
- An item's presence on this list does not mean that the item is necessarily available for direct use by core users.
- Many items are operated by staff only, and some equipment is reserved for use in internal core workflows.
- While we endeavor to keep the list up to date, if you are looking for something not on the list, it's worth contacting the most relevant core to ask.
Most cores will be somewhat flexible to accommodate the needs of BCM scientists, so if you see a unique piece of equipment in the list which is not listed as an available service of the core, please contact the core director and explain your need. In many cases some sort of accommodation can be made, and the core director may have knowledge of other nearby facilities which will better serve your needs. The ATC is here to serve the needs of BCM scientists, regardless of your position, don't hesitate to contact cores for help or advice.
All Core Equipment List
| Core | Instrument | Description |
|---|---|---|
| Biofluids Repository Core | Cell Analyzer - Cytek Muse | Tabletop microcapillary cell analyzer (simple 3 parameter flow cytometer) |
| Biofluids Repository Core | Cell Counter - Sysmex Hematology Analyzer | Performs automated blood counts and cell analysis |
| Cytometry and Cell Sorting Core | Cell Sorter - BD Ariall (x2) | 5 laser conventional flow cytometric cell sorter, capable of sorting individual cells for downstream research applications |
| Cytometry and Cell Sorting Core | Core | 5 laser conventional flow cytometric cell sorter, capable of sorting individual cells for downstream research applications |
| Cytometry and Cell Sorting Core | Cell Sorter - BD FACSDiscover S8 (x2) | 5 laser imaging and spectral flow cytometric cell sorters, capable of sorting individual cells for downstream research applications |
| Cytometry and Cell Sorting Core | Cell Sorter - Miltenyi AutoMACS Pro | A benchtop instrument for automated cell sorting based on magnetic labeling, capable of isolating target cells with high purity and speed. |
| Single Cell Genomics Core | Cell Sorter - Pala | Benchtop cell sorter |
| Cytometry and Cell Sorting Core | Cell Sorter - Sony MA900 | Benchtop cell sorter that features 4 lasers (405, 488, 561, 638 nm) and can detect up to 14 fluorescence channels. |
| Human Stem Cell and Neuronal Differentiation Core | Cell Sorter - Wolf | Gentle, microfluidics-based cell sorter that uses a disposable cartridge and can sort at rates of up to 30,000 cells per second. |
| Cytometry and Cell Sorting Core | Cell Viability Analyzer - Beckman Coulter Vi-Cell | Automated cell viability analyzer that uses trypan blue dye exclusion to count and determine viability for a quick analysis of a cell population. |
| Cytometry and Cell Sorting Core | Flow Cytometer - BD LSRII | High-end conventional flow cytometer, configured with 5 lasers and 18 fluorescence detectors for complex multi-color analysis. |
| Cytometry and Cell Sorting Core | Flow Cytometer - BD LSR Fortessa (x2) | Conventional flow cytometer configured with 5 lasers and up to 18 colors for deep phenotypic analysis. |
| Biofluids Repository Core | Flow Cytometer - BD LSR Fortessa | Conventional flow cytometer configured with 5 lasers and up to 18 colors for deep phenotypic analysis. |
| Cytometry and Cell Sorting Core | Flow Cytometer - BD LSRII | High-end conventional flow cytometer, configured with 4 lasers and 18 fluorescence detectors for complex multi-color analysis. |
| Cytometry and Cell Sorting Core | Flow Cytometer - BD Cantoll YG | Conventional flow cytometer configured with a blue, red, and yellow-green laser, capable of a standard 8 color analysis. |
| Cytometry and Cell Sorting Core | Flow Cytometer - BD Cantoll V | Conventional flow cytometer configured with a blue, red, and violet laser, capable of a standard 8 color analysis. |
| Cytometry and Cell Sorting Core | Flow Cytometer - BD Symphony A5 | Flow cytometer that can be configured with up to 5 lasers and up to 31 fluorescence channels for highly complex multi-parameter analysis. |
| Cytometry and Cell Sorting Core | Flow Cytometer - Cytek Aurora | Full spectrum flow cytometer that uses 5 lasers and APD detector arrays utilize complete emission spectrum of each fluorochrome, enabling the detection of over 40 colors. |
| Cytometry and Cell Sorting Core | Flow Cytometer - Cytek Northern Lights | Full spectrum flow cytometer that uses 3 lasers and APD detector arrays utilize complete emission spectrum of each fluorochrome, enabling the detection of over 20 colors. |
| Cytometry and Cell Sorting Core | Flow Cytometer - ThermoFisher AttuneNXT | Acoustic focusing flow cytometer that typically uses up to 4 lasers and can detect up to 14 colors for rapid and accurate cell analysis. |
| Cytometry and Cell Sorting Core | Imaging Flow Cytometer - Cytek ImageStreamX MkII | Imaging flow cytometer that combines traditional flow cytometry with high-speed imaging, using up to 4 lasers and capable of capturing up to 12 channels of images per cell. |
| Cytometry and Cell Sorting Core | Imaging Flow Cytometer - BD FACSDiscover A8 | 5 laser imaging and spectral flow cytometric cell analyzers, capable of analyzing individual cells for research applications |
| Core | Instrument | Description |
|---|---|---|
| Recombinant Protein Production and Characterization Core | AUC - Beckman | Analytical ultracentrifuge |
| Advanced Cell Engineering and 3D Models Core | Centrifuge - Eppendorf (x3) | General purpose Eppendorf centrifuges |
| Gene Vector Core | Centrifuge - Avanti JR15R | A high-speed refrigerated centrifuge used for separating larger sample volumes in a temperature-controlled environment. |
| Gene Vector Core | Centrifuge - Beckman Avanti JXN26 | A high-speed, large volume centrifuge designed for purifying and separating cells and other biological samples. |
| Recombinant Protein Production and Characterization Core | Centrifuge - Sorvall LYNX 6000 | Superspeed large volume centrifuge |
| Biofluids Repository Core | Centrifuge - Sorvall Legend Rt | General purpose floor standing centrifuge |
| Recombinant Protein Production and Characterization Core | Centrifuge - Sorvall X4FR | Refrigerated centrifuge |
| Biofluids Repository Core | Microcentrifuge - Hettich Mikro 22R | Refrigerated microcentrifuge |
| Gene Vector Core | Ultracentrifuge - Beckman Optima XPN 90 | Standard ultracentrifuge |
| Gene Vector Core | Ultracentrifuge - Sorvall WX80 | Standard ultracentrifuge |
| Mass Spectrometry Proteomics Core | Ultracentrifuge - Beckman Tabletop | A smaller volume tabletop ultracentrifuge |
| Core | Instrument | Description |
|---|---|---|
| MHC Tetramer Core | FPLC - AktaPure 25 L | Fast Protein Liquid Chromatography (FPLC) system specifically designed for high-resolution purification of proteins. |
| CryoEM and CryoET Core | FPLC - AktaPure | Fast Protein Liquid Chromatography (FPLC) system specifically designed for high-resolution purification of proteins. |
| Recombinant Protein Production and Characterization Core | FPLC - AktaPure | Fast Protein Liquid Chromatography (FPLC) system specifically designed for high-resolution purification of proteins. |
| Mass Spectrometry Proteomics Core | HPLC - Easy nLC 1200 (UHPLC) | Ultra-high-performance liquid chromatography (UHPLC) system that delivers nanoflow gradients for the separation of complex peptide mixtures in bottom-up proteomics workflows. |
| Mass Spectrometry Proteomics Core | HPLC - Agilent Infinity 1260 | High-performance liquid chromatography (HPLC) system used for offline peptide fractionation, improving proteome depth and coverage in bottom-up proteomics workflows. |
| Core | Instrument | Description |
|---|---|---|
| Bioengineering | Hermle 5-axis CNC Mill | Hermle 5-axis CNC Mill: A high-precision computer-controlled milling machine that can simultaneously move a cutting tool along five different axes to create complex, three-dimensional parts. |
| Bioengineering | Haas CNC Lathe | Haas CNC Lathe: A computer-controlled turning machine that rotates a workpiece to create cylindrical parts. |
| Bioengineering | Thorlabs Optical Workstation | Thorlabs Optical Workstation: A workbench and support system for building and testing optical setups, experiments, and prototypes. |
| Bioengineering | Epilog Laser Cutter | Epilog Laser Cutter: A computer-controlled machine that uses a laser beam to precisely cut, engrave, or mark materials like wood, plastic, and paper. |
| Bioengineering | Stratasys 3-D Printer | Stratasys 3-D Printer: An additive manufacturing machine that builds three-dimensional palstic objects layer by layer from a 3D file. |
| Core | Instrument | Description |
|---|---|---|
| Mouse Metabolism and Phenotyping Core | Animal Monitoring - CLAMS (10 cage & 16 cage) | Comprehensive Lab Animal Monitoring Systems used to measure metabolism, feeding, drinking, and activity in groups of mice. |
| Zebrafish | Aquatic Animal Tracker - Danio Vision | An automated tracking system designed to monitor and analyze the behavior and activity of zebrafish and other small aquatic animals. |
| Mouse Metabolism and Phenotyping Core | DEXA | Dual-energy X-ray absorptiometry, a scanning technology used to measure body composition, including bone mineral density, fat mass, and lean mass. |
| Mouse Metabolism and Phenotyping Core | IVIS X5 | An in-vivo imaging system that uses bioluminescence and fluorescence to visualize and track cells or genetic activity within living animals. |
| Patient-derived Xenograft Core | IVIS Lumina X5 (x2) | In vivo imaging system using bioluminescence and fluorescence to visualize biological processes in small living animals. |
| Mouse Metabolism and Phenotyping Core | MRI - EchoMRI | A system that uses magnetic resonance to quickly and accurately measure body composition (fat, lean mass, free water) in live animals without sedation. |
| CAMRI | MRI - MR5 Magnetom Prisma Fit | Siemens 3T magnetic resonance imaging scanner used for advanced neuroimaging and clinical research with MR5 Headphones and MR4 32" screen |
| CAMRI | MRI - MR4 Magnetom Prisma Fit | Siemens 3T magnetic resonance imaging scanner at CAMRI used for advanced neuroimaging and clinical research. |
| Mouse Metabolism and Phenotyping Core | MRI - Bruker Pharmascan 7T | Small animal (mouse) MRI - Bruker Pharmascan 7T with Paravision 4 console |
| Mouse Metabolism and Phenotyping Core | IITC NIBP | A non-invasive blood pressure monitoring system used for conscious or anesthetized small animals. |
| Zebrafish | Swim Tunnel - Loligo | Measures the metabolic rate of aquatic animals by forcing them to swim against a controlled water current. |
| Patient-derived Xenograft Core | Ultrasound - Vega | Easy-to-use ultrasound system enables high-speed and high-throughput imaging,. requires minimal training. |
| Mouse Metabolism and Phenotyping Core | Ultrasound - Vevo F2 | A high-resolution ultrasound imaging system used for real-time, in-vivo imaging of small animals. |
| Mouse Metabolism and Phenotyping Core | XFe96 | Measures the metabolic rates of cells by analyzing oxygen consumption and extracellular acidification in a 96-well plate format. |
| Optical Imaging and Vital Microscopy Core | Macromolecular X-Ray Crystallography Core MicroCT - Bruker Skyscan 1272 | A high-resolution Macromolecular X-Ray Crystallography Core micro-CT scanner used for non-destructive 3D imaging of biological samples. |
| Mouse Metabolism and Phenotyping Core | Mediso Nanoscan SPECT/CT/PET | Combination unit for simultaneous anatomical and functional nuclear medicine imaging in animals |
| Core | Instrument | Description |
|---|---|---|
| Antibody-Based Proteomics Core | Arrayer - Quanterix 2470 | Precisely prints tiny amounts of biological samples onto a surface for analysis. |
| Antibody-Based Proteomics Core | Arrayer - Aushon 2470 | Precisely prints tiny amounts of biological samples onto a surface for analysis. |
| Biofluids Repository Core | FACS Lyse Wash Assistant | Lyses, mixes, washes, and fixes samples in preparation for flow cytometry. |
| Recombinant Protein Production and Characterization Core | Microfluidizer - Small Volume Model LM20-30 | Microfluidizer - Small Volume Model LM20-30: An instrument that uses high-pressure fluid streams to create uniform emulsions and dispersions on a very small scale. |
| Biofluids Repository Core | Plate Washer - Tecan Hydrospeed | Automated microplate washer |
| Mass Spectrometry Proteomics Core | Robot - Agilent BRAVO AssayMAP | Automated liquid handling platform specifically designed for sample preparation for mass spectrometry and other analytical applications. |
| Advanced Cell Engineering and 3D Models Core | Robot - Beckman Biomek NX | Robotic liquid handling system used for automating a wide range of tasks in molecular biology, such as pipetting and sample preparation. |
| Integrated Microscopy Core | Robot - Beckman i5 | High-throughput robotic system used to automate laboratory workflows, especially for genomics and drug screening. |
| Recombinant Protein Production and Characterization Core | Robot - Clonacell Easy Pick Starlet, Hamilton | Robotic system for the automated picking of bacterial or yeast colonies from agar plates. |
| Single Cell Genomics Core | Robot - Connect (single cell) | Automated liquid handling system (support will end on 2027) |
| Biofluids Repository Core | Robot - Opentrons OT2 Robotic Pipetting System | High precision, open-source liquid handler |
| Genetically Engineered Rodent Models Core | Robot - QIAgility System HEPA / UV with laptop | Robotic pipetting system that automates the setup of quantitative PCR, minimizing human error. |
| RNA-In Situ Hybridization Core | Robot - Tecan EVO Genepaint | Robot for for in situ hybridization (ISH) and fluorescence in situ hybridization (FISH) |
| Genomic and RNA Profiling Core | Robotic Workstation - Hamilton NGS Star | Robotic workstation for automating next-generation sequencing (NGS) sample preparation, from library prep to normalization. |
| Core | Instrument | Description |
|---|---|---|
| Recombinant Protein Production and Characterization Core | BLI - Octet | Bio-Layer Interferometry (BLI) technology for real-time, label-free analysis of molecular interactions, such as protein-protein binding. |
| Recombinant Protein Production and Characterization Core | DLS | Dynamic light scattering used to determine molecular weight, size distributions, and conformation of molecules in solution. |
| Recombinant Protein Production and Characterization Core | DSF | Differential Scanning Fluorimetry, a technique used to measure the thermal stability of proteins. |
| NMR and Drug Metabolism Core | Imaging MS - Bruker tims TOF MALDI 2 Flex IMS | Imaging mass spectrometer that uses ion mobility spectrometry to add an extra dimension of separation, improving the analysis of complex samples. |
| Recombinant Protein Production and Characterization Core | ITC - Malvern | Isothermal titration calorimetry to measure molecular interactions, such as protein-protein binding. |
| Recombinant Protein Production and Characterization Core | MALS - Mals Systems | Multi-angle light scattering systems (size-exclusion SEC or composition gradient CG) used to determine the absolute molecular weight, size, and conformation of molecules in solution. |
| Cytometry and Cell Sorting Core | Mass Cytometer - Standard Biotools Helios/Hyperion | Mass cytometer (CyTOF) that use a mass spectrometer to analyze cells and tissue slides labeled with heavy metal isotopes, allowing for the simultaneous detection of over 40 parameters. |
| Cytometry and Cell Sorting Core | Mass Cytometer - Standard Biotools CyTOF XTi | Mass cytometers (CyTOF) that use a mass spectrometer to analyze cells and tissue slides labeled with heavy metal isotopes, allowing for the simultaneous detection of over 40 parameters. |
| Mass Spectrometry Proteomics Core | MS - Thermo Fisher Orbitrap Fusion Lumos ETD | High-resolution tribrid mass spectrometer offering Orbitrap, ion trap, and quadrupole technologies, with ETD capability for in-depth protein identification, quantification, and post-translational modification analysis in bottom-up proteomics workflows. |
| Mass Spectrometry Proteomics Core | MS - ThermoFisher Orbitrap Exploris 480 | High-resolution mass spectrometer with faster scanning Orbitrap offering in-depth protein identification and quantification in bottom-up proteomics workflow. |
| Mass Spectrometry Proteomics Core | MS - ThermoFisher Orbitrap Eclipse | Next-generation tribrid mass spectrometer with enhanced sensitivity and scan speed offering intelligent acquisition features such as real-time search for improved protein detection and quantification. |
| Mass Spectrometry Proteomics Core | MS - Bruker Tims TOF Ultra2 | Next generation mass spectrometer that offers unmatched sensitivity for low input, single cell proteomics |
| Metabolomic Core | MS - AB SCIEX TripleTOF 5600 System | Hybrid mass spectrometer that combines a triple quadrupole with time-of-flight technology for high-speed, accurate mass analysis. |
| Metabolomic Core | MS - ThermoFisher IQ-X Orbitrap | High-resolution Orbitrap mass spectrometer optimized for small molecule analysis in fields like metabolomics and environmental testing. |
| Metabolomic Core | MS - Aglient QQQ 6495 LC-QQQ (3 instruments) | Tandem mass spectrometry systems (Liquid Chromatography-Triple Quadrupole) used for Targeted metabolomics and Targeted metabolic flux |
| Metabolomic Core | MS - SCIEX 7500 Plus TRAP Mass Spectrometry | Tandem mass spectrometry systems (Liquid Chromatography-Triple Quadrupole) used for highly sensitive and selective quantitation of target lipids |
| NMR and Drug Metabolism Core | MS - TSQ Quantis Quad | Triple quadrupole mass spectrometer designed for high-performance and high-throughput quantitation of molecules. |
| Biofluids Repository Core | Multiplex Analyzer- Luminex xMAP INTELLIFLEX | Multiplex protein and RNA analysis |
| Biofluids Repository Core | Multiplex Analyzer - Luminex MagPix | Multiplex protein and RNA analysis |
| Mass Spectrometry Proteomics Core | Spectrophotometer - Denovix DS-11 | Compact spectrophotometer used to measure the concentration of nucleic acids (DNA/RNA) and proteins in very small sample volumes. |
| Core | Instrument | Description |
|---|---|---|
| Human Tissue Acquisition and Pathology Core | 10x Genomics Visium Cytassist | An instrument for automated tissue processing and transfer for spatial transcriptomics, allowing for the mapping of gene expression in tissue sections. |
| Single Cell Genomics Core | 10x Genomics Xenium | Instrument for spatial biology applications, allowing for the analysis of gene expression within the context of tissue location. |
| Integrated Microscopy Core | Bruker Vutara 352 | A super-resolution microscope (not IMC service) |
| Integrated Microscopy Core | Cytation 5 | A multi-mode microplate reader that combines plate reading with automated microscopy for cell-based assays. |
| Antibody-Based Proteomics Core | GenePix 4400AL Scanner | A microarray scanner used to analyze the results of DNA, protein, or other types of microarrays. |
| Genetically Engineered Rodent Models Core | EmbryoScope+ (ES+) | A time-lapse imaging system specifically designed to monitor and assess the development of embryos. |
| Macromolecular X-Ray Crystallography Core | Formulatrix Rock Imager 2 with UV/ Fluorescence Option | A robotic imaging system used to automatically capture images of protein crystallization plates. |
| Gene Vector Core | iBright 1500 | Imaging system used to capture and analyze gels and western blots. |
| Integrated Microscopy Core | Incucyte S3 | A live-cell analysis system that captures time-lapse images of cells growing inside an incubator. |
| Advanced Cell Engineering and 3D Models Core | IVIS Lumina 3 | In vivo imaging system using bioluminescence and fluorescence to visualize biological processes in small living animals. |
| Human Stem Cell and Neuronal Differentiation Core | Keyence Microscope | Digital microscope with extended depth of field. |
| Zebrafish | Lecia Flurecence Dissecting Stereo Microscope | A dissecting microscope that can also perform fluorescence imaging. |
| Macromolecular X-Ray Crystallography Core | Lecia M125 C | A stereo microscope with high magnification and resolution. |
| Zebrafish | Lecia M125 C | A stereo microscope with high magnification and resolution. |
| Mouse Metabolism and Phenotyping Core | Leica M80 | A stereo microscope used for high-quality, three-dimensional observation and documentation of samples. |
| Integrated Microscopy Core | Leica Stellaris | A confocal laser scanning microscope used for high-resolution, three-dimensional imaging of cells and tissues. |
| Optical Imaging and Vital Microscopy Core | Leica TCS SP8 MP | A confocal/multiphoton laser scanning microscope used for deep tissue imaging in living animals. |
| Optical Imaging and Vital Microscopy Core | Logos X-CLARITY System | Automates the tissue clearing with X-CLARITY protocol, making tissues transparent for 3D imaging. |
| Single Cell Genomics Core | Merscope | Instrument for spatial biology applications, allowing for the analysis of gene expression within the context of tissue location. |
| Advanced Cell Engineering and 3D Models Core | Motic Microscope | General purpose microscopes used for basic visualization and observation of samples. |
| Integrated Microscopy Core | Nanolive 3D CellExplorer | A specialized microscope that uses holographic index of refraction microscopy for label-free identification of organelles. |
| Integrated Microscopy Core | Nikon A1-Rs | A confocal laser scanning microscope used for high-resolution, three-dimensional imaging of cells and tissues. |
| Integrated Microscopy Core | Nikon Ci-L | An upright light microscope used for routine brightfield and phase contrast imaging. |
| Advanced Cell Engineering and 3D Models Core | Nikon Eclipse Flurescent Microscope | General purpose fluorescence microscope |
| Patient-derived Xenograft Core | Nikon Eclipse Flurescent Microscope | General purpose fluorescence microscope |
| Human Tissue Acquisition and Pathology Core | Nikon slide scanner | Whole slide imaging of tissue sections. Brightfield and fluorescent imaging. |
| Biofluids Repository Core | Nikon SMZ1000 Stereomicroscope | Standard stereo microscope |
| Integrated Microscopy Core | Olympus IX83 | An inverted research microscope used for live-cell imaging and advanced microscopy techniques. |
| Human Tissue Acquisition and Pathology Core | Vectra 3 Upgrade | A system for multispectral pathology imaging, used to analyze multiple biomarkers on a single tissue slide. |
| RNA-In Situ Hybridization Core | Zeiss AxioScan: Z1 and 7 Slide Scanners | Whole slide imaging of tissue sections. Brightfield and fluorescent imaging. |
| Gene Vector Core | Zeiss Axiovert | An inverted microscope used for cells in culture plates and dishes |
| Genetically Engineered Rodent Models Core | Zeiss Axiovert | An inverted microscope used for cells in culture plates and dishes |
| Optical Imaging and Vital Microscopy Core | Zeiss AxioZoom | A hybrid stereo/compound fluorescence microscope that provides high-resolution imaging with a wide field of view. |
| Genetically Engineered Rodent Models Core | Zeiss CEROS II- Animal | System used for analyzing sperm motility and concentration in animal samples. |
| Optical Imaging and Vital Microscopy Core | Zeiss Lightsheet Z.1 | A specialized fluorescence microscope that uses a thin sheet of light to rapidly image large, transparent samples with minimal damage. |
| Optical Imaging and Vital Microscopy Core | Zeiss LSM 880 Airyscan | Confocal laser scanning microscope with Airyscan super-resolution detection used for high-resolution 3D imaging of cells and tissues. |
| Integrated Microscopy Core | Yokogawa CV8000 | A high-content imaging system used for automated screening and analysis of a large number of cells. |
| Core | Instrument | Description |
|---|---|---|
| Genomic and RNA Profiling Core | Automated Electrophoresis - Agilent Bioanalyzer 2100 | Microfluidics-based system used to analyze the size, quantity, and quality of DNA, RNA, and protein samples. |
| Genomic and RNA Profiling Core | Automated Electrophoresis - Agilent TapeStation 2200 | Automated electrophoresis system used for the quality control of nucleic acid samples. |
| Genomic and RNA Profiling Core | CE - Agilent Femto Pulse | Pulsed-field capillary electrophoresis system used for high-resolution analysis of large nucleic acid fragments. |
| Genetically Engineered Rodent Models Core | CE - Qiagen QIAxcel Advanced | Capillary electrophoresis system for the automated analysis and quality control of nucleic acids. |
| Genomic and RNA Profiling Core | DNA Shearing - Diagenode Megaruptor 3 | Uniform DNA shearing for sequencing. |
| Genomic and RNA Profiling Core | DNA Sizing - Sage Science Pippin HT | Automated system for size-selecting DNA fragments, a crucial step in preparing sequencing libraries. |
| Genomic and RNA Profiling Core | DNA Sizing - Sage Science Blue Pippin | Automated system for size-selecting DNA fragments, a crucial step in preparing sequencing libraries. |
| Antibody-Based Proteomics Core | Multiplex Assay - Bio-Plex 200 & Luminex 200 | Multiplexed bead-based assay systems used to simultaneously measure multiple analytes (e.g., proteins, nucleic acids) in a single sample. |
| Advanced Cell Engineering and 3D Models Core | PCR - ABI StepOnePlus qPCR | Quantitative real-time PCR (qPCR) system used to amplify and quantify nucleic acids as the reaction progresses. |
| Zebrafish | PCR - Bio-Rad CFX Opus 96 rtPCR | 96 well 5 color + FRET Real time PCR system |
| Advanced Cell Engineering and 3D Models Core | PCR - Eppendorf | Standard PCR |
| Genetically Engineered Rodent Models Core | PCR - ProFlex 3X32 | ProFlex 3X32-well PCR System: A versatile thermocycler with multiple independent blocks for running various PCR protocols simultaneously. |
| Genetically Engineered Rodent Models Core | PCR - QuantStudio 7 Flex 96W DSTP | A high-performance quantitative real-time PCR (qPCR) system for advanced gene expression and genotyping studies. |
| Genetically Engineered Rodent Models Core | PCR - QX200 ddPCR | Digital droplet PCR (ddPCR) system used for highly precise absolute quantification of nucleic acids. |
| Gene Vector | PCR - Stratagene MX3005P qPCR | Older quantitative real-time PCR (qPCR) system for gene expression analysis and genotyping. |
| Genomic and RNA Profiling Core | PCR - ViiA7 qRT-PCR instrument | Quantitative real-time PCR (qRT-PCR) system used for gene expression analysis and pathogen detection. |
| Gene Vector | Plate Reader - ClarioSTAR Plus | Multi-mode microplate reader used for a wide range of assays in life science research. |
| Advanced Cell Engineering and 3D Models Core | Plate Reader - LUMIStar Omega | Multi-label plate reader used to measure a variety of luminescence assays in microplates. |
| Genomic and RNA Profiling Core | Sequencer - Illumina iSeq 100 | DNA sequencing system that use different scales of throughput to sequence genomes, transcriptomes, and other genetic material. |
| Genomic and RNA Profiling Core | Sequencer - Illumina NovaSeq X | DNA sequencing system that use different scales of throughput to sequence genomes, transcriptomes, and other genetic material. |
| Genomic and RNA Profiling Core | Sequencer - Oxford Nanopore Promethion 24 | High-throughput DNA and RNA sequencing device that uses nanopore technology for long-read sequencing. |
| Single Cell Genomics Core | Single Cell Partitioning - Chromium Controller 10915 | Microfludics system performing single cell partitioning and barcoding (old version, support will end on 2027) |
| Single Cell Genomics Core | Single Cell Partitioning - Chromium Controller 12239 | Microfludics system performing single cell partitioning and barcoding (old version, support will end on 2027) |
| Single Cell Genomics Core | Single Cell Partitioning - Chromium X | Microfludics system performing single cell partitioning and barcoding (newer version of chromium controller) |
| Advanced Cell Engineering and 3D Models Core | Spectrophotometer - Nanodrop 8000 | UV-Vis spectrophotometer |
| Core | Instrument | Description |
|---|---|---|
| CryoEM and CryoET Core | CryoEM and CryoET Core - JEOL JEM2100 | A 200keV LaB6 CryoEM and CryoET Core with a DE12 camera for initial specimen screening |
| CryoEM and CryoET Core | CryoEM and CryoET Core - JEOL JEM2200FS | A 200keV CryoEM and CryoET Core with a field emission gun and a DE20 camera. Limited to ~5-7 Å resolution. |
| CryoEM and CryoET Core | CryoEM and CryoET Core - JEOL JEM3200FSC | A 300keV CryoEM and CryoET Core with a field emission gun, energy filter and a K2 summit detector. Capable of ~3 Å resolution. |
| CryoEM and CryoET Core | CryoEM and CryoET Core - ThermoFisher Glacios | A 200keV CryoEM and CryoET Core with a field emission gun, an autoloader, a Falcon 4 and Apollo detectors, capable of ~2.5 Å resolution single particle analysis |
| CryoEM and CryoET Core | Cryo FIB/SEM - Thermofisher Aquilos 2 with IFLM and Lift-out | A second generation Cryo-FIB/SEM with 4-channel correlative wide-field fluorescence |
| CryoEM and CryoET Core | Cryo Grid Plunger - Leica | Grid vitrification robot with 1-sided blotting |
| CryoEM and CryoET Core | Cryo Grid Plunger - ThermoFisher Vitrobot | Grid vitrification robot with 2-sided blotting |
| CryoEM and CryoET Core | Cryo High Pressure Freezer - Leica EM-ICE | A high pressure freezer for rapid freezing of cellular/tissue specimens without freezing damage |
| Macromolecular X-Ray Crystallography Core | Crystallization robot - Mosquito | Robot to setup crystallization screening plates |
| CryoEM and CryoET Core | Glow Discharge | Used for grid preparation before specimen deposition in CryoEM and CryoET Core |
| NMR and Drug Metabolism Core | NMR - Bruker NMR 600 MHz | High-field nuclear magnetic resonance spectrometers used for molecular structure elucidation and analysis. |
| NMR and Drug Metabolism Core | NMR - Bruker NMR 800MHz | High-field nuclear magnetic resonance spectrometers used for molecular structure elucidation and analysis. |
| CryoEM and CryoET Core | Plasma Cleaner | Variety of purposes, primarily grid-prep before CryoEM and CryoET Core |
| CryoEM and CryoET Core | TEM - JEM1230 | A 120 keV LaB6 TEM for room temperature imaging |
| Core | Instrument | Description |
|---|---|---|
| Human Tissue Acquisition and Pathology Core | Automated Film Coverslipper - Tissue-Tek | Automatically places a glass coverslip over a stained tissue section on a slide for permanent mounting. |
| Antibody-Based Proteomics Core | Autostainer - Link48 (x2) | An automated slide stainer for preparing tissue samples for immunohistochemistry (IHC) and other staining procedures. |
| Patient-derived Xenograft Core | Cassette Printer - Rankin | Prints identifying text and barcodes directly onto tissue cassettes, which hold samples during processing. |
| Human Tissue Acquisition and Pathology Core | Cryostat - Cryostar NX50 | Cuts frozen tissue samples into very thin sections for microscopic examination. |
| Human Tissue Acquisition and Pathology Core | Cryostat - Microm 505E | Cuts frozen tissue samples into very thin sections for microscopic examination. |
| RNA-In Situ Hybridization Core | Cryostat - Leica CM3050 | Cuts frozen tissue samples into very thin sections for microscopic examination. |
| Human Tissue Acquisition and Pathology Core | Laser Cassette Printer - Epredia FA-Tech | Prints identifying text and barcodes directly onto tissue cassettes, which hold samples during processing. |
| Human Tissue Acquisition and Pathology Core | Microtome - Leica 2135 | Cuts thin slices of tissue for microscopic examination after the tissue has been processed and embedded in a block. |
| Genetically Engineered Rodent Models Core | Microinjector - Eppendorf™ FemtoJet™ 4i (x2) | A microinjection system used to inject very small volumes of fluids into cells or embryos. |
| Genetically Engineered Rodent Models Core | Micromanipulator - 3 Axis Joystick, MO202U, Narashige | Micromanipulator, 3 Axis Joystick, MO202U, Narashige: A precision instrument used for fine motor control to manipulate cells, tissues, or microscopic objects under a microscope. |
| Human Tissue Acquisition and Pathology Core | Slide Printer - Epredia Slidemate | An automated slide printer used to label microscope slides with text and barcodes. |
| Genomic and RNA Profiling Core | Sonicator - Covaris LE220 | Uses high-frequency sound waves to shear DNA for sequencing, preparing chromatin, or disrupting cells. |
| Advanced Cell Engineering and 3D Models Core | Tissue Dissociator - GentleMACS | Uses a combination of mechanical force and enzymes to gently and automatically dissociate tissues into single-cell suspensions or smaller tissue fragments for downstream analysis |
| Patient-derived Xenograft Core | Tissue Dissociator - GentleMACS Octo | Uses a combination of mechanical force and enzymes to gently and automatically dissociate tissues into single-cell suspensions or smaller tissue fragments for downstream analysis |
| Advanced Cell Engineering and 3D Models Core | Tissue Lyser LT | A benchtop bead mill homogenizer that uses a high-speed shaking motion to lyse cells and tissues for molecular extraction. |
| Human Tissue Acquisition and Pathology Core | Tissue Processor - Tek VIP6 | Automatically processes and prepares tissue samples for embedding and sectioning by dehydrating and clearing them. |
| Patient-derived Xenograft Core | Tissue Slicer | Used to slice or section tissue, often without embedding, for various types of analysis. |
| Genetically Engineered Rodent Models Core | Transfection System - Bulldog Bio NEPA21 Electro-Kinetic | NEPA21 Electro-Kinetic Transfection System (Bulldog Bio): A electroporation system that uses electrical pulses to introduce nucleic acids or other molecules into cells and embryos. |






