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  1. Baylor College of Medicine
  2. Research
  3. ATC Core Labs
  4. Optical Imaging and Vital Microscopy Core
  5. Microscopy Methods
  6. LightSheet Microscopy
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    • Bruker SkyScan 1272 μCT Scanner
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LightSheet Microscopy

LightSheet microscopy is a fluorescence technique that projects a thin ‘sheet’ of excitation light perpendicular to the direction of observation. This type of a system uses cylindrical optics to focus a laser into a narrow field in the Z dimension, thus illuminating the entire XY image plane but only a small volume in the focus (or Z) dimension.

LightSheet Microscopy

Emission signal from this volume is collected by a CCD camera positioned perpendicular to this plane – imaging the entire XY dimension as you would in a traditional epifluorescence microscope. The result is an optical section that is slightly thicker than a typical confocal section, but can be imaged at a much faster rate.

Perhaps most importantly, the sample holder can be translated in 4 dimensions (XYZ, 360° Rotation) which allows the user to position the sample for optimal sectioning. A typical confocal only moves in X, Y and Z. The ability of the stage to rotate allows optical sectioning from multiple angles through the specimen. This is very valuable for large scale whole mounts where more traditional imaging from only one angle would be limited by the working distance of the microscope objective, typically a few millimeters. With a system like this you can image a few millimeters from opposite slides of the sample thus doubling the effective sectioning volume.

The LightSheet microscope can be used for imaging entire embryos, brain and other organs from a variety of small animal models. It is a great way to get large volumes of 3D data quickly over a very large field of view.

See our ‘Available Instruments’ list (above right) for details about our lightsheet microscope.

Optical Imaging & Vital Microscopy Core

Phone: (713) 798-6486
Email: oivm@bcm.edu

Available Instruments

Zeiss LightSheet Z.1 Microscope

Optical Imaging and Vital Microscopy Core
  • Services
  • Fees
  • Instrumentation & Technology
    • Bruker SkyScan 1272 μCT Scanner
    • Image Processing/Analysis Workstations
    • Leica SP8 Confocal/Multi-Photon Microscope
    • OPT (Optical Projection Tomography)
    • Zeiss Axio Zoom v16 Stereo Microscope
    • Zeiss LSM 5 LIVE Confocal Microscope
    • Zeiss LSM 7 MP Multi-Photon Microscope
    • Zeiss LSM 780 Confocal Microscope
    • Zeiss LSM 880 with Airyscan FAST Confocal Microscope
    • Zeiss LightSheet Z.1 Microscope
  • Microscopy Methods
    • Confocal Microscopy
    • Fluorescence Microscopy
    • LightSheet Microscopy
    • Multi-Photon Microscopy
    • µCT (Micro Computed Tomography)
  • Request Form
  • Policies
  • Publications
  • Core Staff

Contact OiVM

Phone 713–798–6486
Email oivm@bcm.edu

Optical Imaging and Vital Microscopy Core

One Baylor Plaza Cullen Building 113A/114A Houston, TX 77030

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