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  1. Baylor College of Medicine
  2. Research
  3. ATC Core Labs
  4. Optical Imaging and Vital Microscopy Core
  5. Microscopy Methods
  6. Fluorescence Microscopy
  • Services
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  • Instrumentation & Technology
    • Bruker SkyScan 1272 μCT Scanner
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Fluorescence Microscopy

Fluorescence is the foundation of our core. The bulk of instruments available for high resolution imaging at the OiVM are based on fluorescence. Fluorescence microscopy is a type of imaging where the emission signal from fluorophores such as molecules, quantum dots, nanoparticles, etc. is used to visualize cells and structures on a microscopic scale.

Fluorophores typically used in biology are excited by a specific wavelength of light. This excitation event causes the fluorophore molecules to move from a resting state (s0) to an excited state (s1). Once a fluorophore reaches an excited state (s1) it will begin to relax and enter into an intermediate vibrational state. After entering this vibrational state, it will spontaneously emit light within some defined, usually longer, wavelength range.

jablonski

We can then use a microscope outfitted with filters that separate out excitation wavelength from emission wavelength. Cameras and other detectors can then be used to image the location of the fluorescence emission within the sample. Microscopes can be configured with many filter sets designed to image multiple fluorophores automatically. On our more advanced confocal systems, spectral array detectors are used to image up to 10 fluorophores simultaneously.

fluorescence-diagram

See our ‘Available Instruments’ list (above right) for details about our microscopes that support fluorescence imaging.

Optical Imaging & Vital Microscopy Core

Phone: (713) 798-6486
Email: oivm@bcm.edu

Available Instruments

Zeiss LSM 880 with Airyscan FAST Confocal Microscope

Zeiss LSM 780 Confocal Microscope

Zeiss Lightsheet Z.1 Microscope

Leica SP8 Confocal/Multi-Photon Microscope

Zeiss LSM 7 MP Multi-Photon Microscope

Zeiss LSM 5 LIVE Confocal Microscope

Zeiss Axio Zoom v16 Stereo Microscope

OPT Microscope

Optical Imaging and Vital Microscopy Core
  • Services
  • Fees
  • Instrumentation & Technology
    • Bruker SkyScan 1272 μCT Scanner
    • Image Processing/Analysis Workstations
    • Leica SP8 Confocal/Multi-Photon Microscope
    • OPT (Optical Projection Tomography)
    • Zeiss Axio Zoom v16 Stereo Microscope
    • Zeiss LSM 5 LIVE Confocal Microscope
    • Zeiss LSM 7 MP Multi-Photon Microscope
    • Zeiss LSM 780 Confocal Microscope
    • Zeiss LSM 880 with Airyscan FAST Confocal Microscope
    • Zeiss LightSheet Z.1 Microscope
  • Microscopy Methods
    • Confocal Microscopy
    • Fluorescence Microscopy
    • LightSheet Microscopy
    • Multi-Photon Microscopy
    • µCT (Micro Computed Tomography)
  • Request Form
  • Policies
  • Publications
  • Core Staff

Contact OiVM

Phone 713–798–6486
Email oivm@bcm.edu

Optical Imaging and Vital Microscopy Core

One Baylor Plaza Cullen Building 113A/114A Houston, TX 77030

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