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  1. Baylor College of Medicine
  2. Research
  3. ATC Core Labs
  4. Optical Imaging and Vital Microscopy Core
  5. Publications
  • Services
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  • Instrumentation & Technology
    • Bruker SkyScan 1272 μCT Scanner
    • Image Processing/Analysis Workstations
    • Leica SP8 Confocal/Multi-Photon Microscope
    • OPT (Optical Projection Tomography)
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OIVM Publications

2016

Dickinson ME, Flenniken AM, Ji X, Teboul L, Wong MD, White JK, Meehan TF, Weninger WJ, Westerberg H, Adissu H, Baker CN, Bower L, Brown JM, Caddle LB, Chiani F, Clary D, Cleak J, Daly MJ, Denegre JM, Doe B, Dolan ME, Edie SM, Fuchs H, Gailus-Durner V, Galli A, Gambadoro A, Gallegos J, Guo S, Horner NR, Hsu CW, Johnson SJ, Kalaga S, Keith LC, Lanoue L, Lawson TN, Lek M, Mark M, Marschall S, Mason J, McElwee ML, Newbigging S, Nutter LM, Peterson KA, Ramirez-Solis R, Rowland DJ, Ryder E, Samocha KE, Seavitt JR, Selloum M, Szoke-Kovacs Z, Tamura M, Trainor AG, Tudose I, Wakana S, Warren J, Wendling O, West DB, Wong L, Yoshiki A; International Mouse Phenotyping Consortium.; Jackson Laboratory.; Infrastructure Nationale PHENOMIN, Institut Clinique de la Souris (ICS).; Charles River Laboratories.; MRC Harwell.; Toronto Centre for Phenogenomics.; Wellcome Trust Sanger Institute.; RIKEN BioResource Center., MacArthur DG, Tocchini-Valentini GP, Gao X, Flicek P, Bradley A, Skarnes WC, Justice MJ, Parkinson HE, Moore M, Wells S, Braun RE, Svenson KL, de Angelis MH, Herault Y, Mohun T, Mallon AM, Henkelman RM, Brown SD, Adams DJ, Lloyd KC, McKerlie C, Beaudet AL, Bucan M, Murray SA, High-throughput discovery of novel developmental phenotypes, Nature, 2016, 537(7621):508-514.

Hsu CW, Wong L, Rasmussen TL, Kalaga S, McElwee ML, Keith LC, Bohat R, Seavitt JR, Beaudet AL, Dickinson ME, Three-dimensional microCT imaging of mouse development from early post-implantation to early postnatal stages, Developmental Biology, 2016, 419(2):229-236.

Dharmadhikari AV, Sun JJ, Gogolewski K, Carofino BL, Ustiyan V, Hill M, Majewski T, Szafranski P, Justice MJ, Ray RS, Dickinson ME, Kalinichenko VV, Gambin A, Stankiewicz P, Lethal lung hypoplasia and vascular defects in mice with conditional Foxf1 overexpression, Biology Open, 2016, 5(11):1595-1606.

Singh M, Raghunathan R, Piazza V, Davis-Loiacono AM, Cable A, Vadakkan TJ, Janecek T, Frazier MV, Nair A, Wu C, Larina IV, Dickinson ME, Larin KV, Applicability, usability, and limitations of murine embryonic imaging with optical coherence tomography and optical projection tomography, Biomedical Optics Express, 2016, 7(6):2295-310.

Peng DH, Ungewiss C, Tong P, Byers LA, Wang J, Canales JR, Villalobos PA, Uraoka N, Mino B, Behrens C, Wistuba II, Han RI, Wanna CA, Fahrenholtz M, Grande-Allen KJ, Creighton CJ, Gibbons DL, ZEB1 induces LOXL2-mediated collagen stabilization and deposition in the extracellular matrix to drive lung cancer invasion and metastasis, Oncogene, 2016. [Epub ahead of print]

Gu R, Brown RM 2nd, Hsu CW, Cai T, Crowder AL, Piazza VG, Vadakkan TJ, Dickinson ME, Groves AK, Lineage tracing of Sox2-expressing progenitor cells in the mouse inner ear reveals a broad contribution to non-sensory tissues and insights into the origin of the organ of Corti, Developmental Biology, 2016, 414(1):72-84.

Tajhya RB, Hu X, Tanner MR, Huq R, Kongchan N, Neilson JR, Rodney GG, Horrigan FT, Timchenko LT, Beeton C, Functional KCa1.1 channels are crucial for regulating the proliferation, migration and differentiation of human primary skeletal myoblasts, Cell Death and Disease, 2016, 7(10):e2426.

Pankova D, Chen Y, Terajima M, Schliekelman MJ, Baird BN, Fahrenholtz M, Sun L, Gill BJ, Vadakkan TJ, Kim MP, Ahn YH, Roybal JD, Liu X, Parra Cuentas ER, Rodriguez J, Wistuba II, Creighton CJ, Gibbons DL, Hicks JM, Dickinson ME, West JL, Grande-Allen KJ, Hanash SM, Yamauchi M, Kurie JM, Cancer-Associated Fibroblasts Induce a Collagen Cross-link Switch in Tumor Stroma, Molecular Cancer Research, 2016, 14(3):287-95.

Wang J, Xiao Y, Hsu CW, Martinez-Traverso IM, Zhang M, Bai Y, Ishii M, Maxson RE, Olson EN, Dickinson ME, Wythe JD, Martin JF, Yap and Taz play a crucial role in neural crest-derived craniofacial development, Development, 2016, 143(3):504-15.

2015

Lee CS, Dagnino-Acosta A, Yarotskyy V, Hanna A, Lyfenko A, Knoblauch M, Georgiou DK, Poché RA, Swank MW, Long C, Ismailov II, Lanner J, Tran T, Dong K, Rodney GG, Dickinson ME, Beeton C, Zhang P, Dirksen RT, Hamilton SL, Ca(2+) permeation and/or binding to CaV1.1 fine-tunes skeletal muscle Ca(2+) signaling to sustain muscle function, Skeletal Muscle, 2015, 5:4.

Hsu CW, Poché RA, Saik JE, Ali S, Wang S, Yosef N, Calderon GA, Scott L Jr, Vadakkan TJ, Larina IV, West JL, Dickinson ME, Improved Angiogenesis in Response to Localized Delivery of Macrophage-Recruiting Molecules, PLoS One, 2015, 10(7):e0131643.

Wang S, Burton JC, Behringer RR, Larina IV, In vivo micro-scale tomography of ciliary behavior in the mammalian oviduct, Scientific Reports, 2015, 5:13216.

Burton JC, Wang S, Stewart CA, Behringer RR, Larina IV, High-resolution three-dimensional in vivo imaging of mouse oviduct using optical coherence tomography, Biomedical Optics Express, 2015, 6(7):2713-23.

Lopez AL 3rd, Wang S, Larin KV, Overbeek PA, Larina IV, Live four-dimensional optical coherence tomography reveals embryonic cardiac phenotype in mouse mutant, Journal of Biomedical Optics, 2015, 20(9):090501.

Singh M, Nair A, Vadakkan T, Piazza V, Udan R, Frazier MV, Janecek T, Dickinson ME, Larin KV, Comparison of optical projection tomography and optical coherence tomography for assessment of murine embryonic development, Progress in Biomedical Optics and Imaging - Proceedings of SPIE, 2015, 9334, Article number 93340J.

Anderson GA, Udan RS, Dickinson ME, Henkelman RM, Cardiovascular Patterning as Determined by Hemodynamic Forces and Blood Vessel Genetics, PLoS One, 2015, 10(9):e0137175.

2014

Udan RS, Piazza VG, Hsu CW, Hadjantonakis AK, Dickinson ME, Quantitative imaging of cell dynamics in mouse embryos using light-sheet microscopy, Development, 2014, 141(22):4406-14.

Vadakkan TJ, Landua JD, Bu W, Wei W, Li F, Wong ST, Dickinson ME, Rosen JM, Lewis MT, Zhang M, Wnt-responsive cancer stem cells are located close to distorted blood vessels and not in hypoxic regions in a p53-null mouse model of human breast cancer, Stem Cells Translational Medicine, 2014, 3(7):857-66.

2013

Culver JC, Vadakkan TJ, Dickinson ME, A Specialized Microvascular Domain in the Mouse Neural Stem Cell Niche, PLoS One, 2013, 8(1):e53546.

Goldberg JS, Vadakkan TJ, Hirschi KK, Dickinson ME, A computational approach to detect gap junction plaques and associate them with cells in fluorescent images, Journal of Histochemistry and Cytochemistry, 2013, 61, 283-293.

Chintalgattu V, Rees ML, Culver JC, Goel A, Jiffar T, Zhang J, Dunner Jr. K, Pati S, Bankson JA, Pasqualini R, Arap W, Bryan NS, Taegtmeyer H, Langley RR, Yao H, Kupferman ME, Entman ML, Dickinson ME, Khakoo AY, Coronary Microvascular Pericytes are the Cellular Target of Sunitinib Malate-Induced Cardiotoxicity, Science Translational Medicine, 2013, 5(187), 187ra69.

Udan RS, Vadakkan TJ, Dickinson ME, Dynamic responses of endothelial cells to changes in blood flow during vascular remodeling of the mouse yolk sac, Development, 2013, 140(19), 4041-4050.

Baird BN, Schliekelman MJ, Ahn YH, Chen Y, Roybal JD, Gill BJ, Mishra DK, Erez B, O'Reilly M, Yang Y, Patel M, Liu X, Thilaganathan N, Larina IV, Dickinson ME, West JL, Gibbons DL, Liu DD, Kim MP, Hicks JM, Wistuba II, Hanash SM, Kurie JM, Fibulin-2 is a driver of malignant progression in lung adenocarcinoma, PLoS One, 2013, 8(6):e67054.

2012

Bitner BR, Marcano DC, Berlin JM, Fabian RH, Cherian L, Culver JC, Dickinson ME, Robertson CS, Pautler RG, Kent TA, Tour JM, Antioxidant Carbon Particles Improve Cerebrovascular Dysfunction Following Traumatic Brain Injury, ACS Nano, 2012, 6(9), 8007-8014.

Optical Imaging and Vital Microscopy Core
  • Services
  • Fees
  • Instrumentation & Technology
    • Bruker SkyScan 1272 μCT Scanner
    • Image Processing/Analysis Workstations
    • Leica SP8 Confocal/Multi-Photon Microscope
    • OPT (Optical Projection Tomography)
    • Zeiss Axio Zoom v16 Stereo Microscope
    • Zeiss LSM 5 LIVE Confocal Microscope
    • Zeiss LSM 7 MP Multi-Photon Microscope
    • Zeiss LSM 780 Confocal Microscope
    • Zeiss LSM 880 with Airyscan FAST Confocal Microscope
    • Zeiss LightSheet Z.1 Microscope
  • Microscopy Methods
    • Confocal Microscopy
    • Fluorescence Microscopy
    • LightSheet Microscopy
    • Multi-Photon Microscopy
    • µCT (Micro Computed Tomography)
  • Request Form
  • Policies
  • Publications
  • Core Staff

Contact OiVM

Phone 713–798–6486
Email oivm@bcm.edu

Optical Imaging and Vital Microscopy Core

One Baylor Plaza Cullen Building 113A/114A Houston, TX 77030

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