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Virus-Like Particle Translational Oncology Lab

Virus-like particles by Scott Holmes, CMI

About the Lab

HIV Vaccines

In the Virus-Like Particle Translational Oncology Laboratory, Qizhi Cathy Yao, M.D., Ph.D. is developing non-infectious HIV virus-like particles (VLPs) as candidate HIV mucosal vaccines for both preventive and therapeutic purposes. In preclinical studies, VLPs formed by structural proteins are highly immunogenic and capable of inducing protective immunity against various viral infections. We have modified vaccine immunogens into chimeric HIV VLPs which contain influenza viral surface glycoprotein HA or other immunologically functional molecules. We have shown that the chimeric HIV VLPs can induce enhanced humoral and cellular immune responses against HIV in a mouse model.

We have also studied the basic mechanisms of VLP-induced humoral and cellular immune responses, and other factors that affect these responses. For example, we found that VLP vaccines activate conventional B2 cells and promote B cell differentiation to IgG2a producing plasma cells; that VLP vaccines travel to the lymph nodes upon immunization and can be directly visualized by optical imaging techniques; and that intradermal immunization generates improved responses and might be a preferable delivery route for viral and cancer immunotherapeutic studies involving VLPs.

Since dendritic cells (DCs) have long been known to be pivotal in initiating immune responses, we are also interested in how VLPs modulate DC functions and will evaluate the efficacy of VLP-pulsed DC vaccines. In addition, we are testing the efficacy of modified chimeric VLP oral-mucosal immunization with novel vaccine adjuvants in non-human primates.

Pancreatic Cancer Pathogenesis and Therapy

miR-198 modulation by Scott Holmes, CMI
Modulation of miR-198

Pancreatic cancer has one of the highest mortality rates and ranks as the third leading cause of cancer death in North America. Survival is poor because there are no reliable tests for early diagnosis and no effective therapies to treat metastatic disease. There is a need to better understand the molecular mechanisms of pancreatic cancer tumorigenesis and to develop effective treatments. My lab currently focuses on the study of key molecules in pancreatic cancer, including mesothelin (MSLN), trop2, and semaphorin 3E, and in their mechanisms of regulation. I am also interested in the involvement of microRNAs (miR-198) in pancreatic cancer, and how their dysregulation leads to pathogenesis. We are also currently exploring tumor-associated molecule targeted therapies and RNA interference delivery by liposomes and nanoparticles in vivo.  Our group has shown that vaccinating mice with chimeric virus- like particles containing MSLN significantly inhibited tumor progression, suggesting a new therapeutic vaccine strategy whereby MSLN is targeted to attempt to control pancreatic cancer progression.  We are also employing a K-ras mutation spontaneous pancreatic cancer mouse model, humanized tumor-bearing mouse model, and patient-derived xenograft (PDX) model to study prevention and the potential of our therapeutic regimens in pancreatic cancer.

Funded Studies

  1. A novel miR-198 replacement therapy for pancreatic cancer
    Agency: NIH/NCI R01
  2. Rational Selection of PDAC Samples for Evaluating Immunotherapy Efficacy in PDX-bearing Humanized Mouse Model
    Agency: CPRIT BCM PDX Core
  3. Pancreatic cancer PDX genomic profiling and characterization
    Agency: CPRIT BCM PDX Core
  4. Lymphatic delivery of checkpoint blockade inhibitors for more effective immunotherapy
    Agency: CPRIT 
  5. Stratification of Pancreatic Cancer Subpopulations for Effective Immunotherapy
    Agency: VA CSR&D Merit Award 1 I01 CX001822-01A2
  6. Patient derived classifier for PDAC subtyping to identify responders to therapies
    Agency: Dan L Duncan Comprehensive Cancer Center Seed Fund
  7. Developing a New SCID Swine Pancreatic Ductal Adenocarcinoma Model 
    Agency: St. Luke’s Foundation, Phillip Salem Cancer Research Award
  8. CCSG supplement: PDX Development and Trial Centers Research Network (PDXNet). Development of MTAP targeted combination therapy in pancreatic cancer PDX model
    Agency: NIH U54 supplement

Lab Team

Yao
Qizhi Cathy Yao
M.D., Ph.D.
Professor of Surgery
View profile
Lu
Jian-Ming Lu
Ph.D.
Assistant Professor of Surgery
View profile
Liu
Dongliang Liu
Instructor
View profile

Publications

  • Konduri V, Joseph SK, Byrd TT, Nawas Z, Vazquez-Perez J, Hofferek CJ, Halpert MM, Liu D, Liang Z, Baig Y, Oyewole-Said D, Tsimelzon A, Burns B, Chen C, Levitt JM, Yao Q, Ahmed NM, Hegde M, Decker WK. (2021). A Subset of Cytotoxic Effector Memory T cells Enhances CAR T cell Efficacy in a Model of Pancreatic Ductal Adenocarcinoma.  Science Translational Medicine.  In Press.
  • Phoebe E. Lewis, Ethan C. Poteet, Dongliang Liu, Changyi Chen, Celia C. LaBranche, Sherry A. Stanfield-Oakley, David C. Montefiori, Guido Ferrari, and Qizhi Yao. (2020). CTLA-4 Blockade, during HIV Virus-Like Particles Immunization, Alters HIV-Specific B-Cell Responses. Vaccines. 8(2), 284.
  • Eugene Lurie, Dongliang Liu, Emily L. LaPlante, Lillian R. Thistlethwaite, Qizhi Yao*, and Aleksandar Milosavljevic*. (2020). Histoepigenetic analysis of the mesothelin network within pancreatic ductal adenocarcinoma cells reveals regulation of retinoic acid receptor gamma and AKT by mesothelin.  Oncogenesis. 9:62. *Co-corresponding authors.
  • Duo Liu, Dan Zhou, Yanfa Sun, Jingjing Zhu, Dalia Ghoneim, Chong Wu, Qizhi Yao, Eric R. Gamazon, Nancy J. Cox, Lang Wu. (2020). Identification of candidate susceptibility genes for pancreatic cancer risk: A Transcriptome-Wide Association Study. Cancer Research.  80(20):4346-4354. doi: 10.1158/0008-5472.CAN-20-1353. Epub 2020 Sep 9.
  • Poteet E, Liu D, Liang Z, Van Buren G, Chen C, Yao Q. (2019). Mesothelin and TGF-α predict pancreatic cancer cell sensitivity to EGFR inhibitors and effective combination treatment with trametinib. PLoS One. Mar 28;14(3):e0213294. doi: 10.1371/journal.pone.0213294. eCollection 2019 PMID: 30921351
  • Ethan Poteet, Phoebe Lewis, Zhiyin Yu,Changyi Chen, Guojun Yang, Pramod N Nehete, K Jagannadha Sastry, Gary Fujii, Qizhi Yao.  (2019). SHIV Virus-Like Particles (VLPs) Vaccination Induces Partial Protection from SHIV Challenge in a Rhesus Macaque Model.  Journal of Vaccines and Vaccination.  10:406
  • Lin-Kin Yong, Ethan Poteet, Changyi Chen, Qizhi Yao.  (2018).  Emerging roles of Semaphorin 3E in cancers.  Trends in Cancer Research. 13: 113-129.
  • Lin-Kin Yong, Syeling Lai, Zhengdong Liang, Ethan Poteet, Qianxing Mo, George Van Buren, William E. Fisher, Changyi Chen, Qizhi Yao. (2016) Overexpression of Semaphorin-3E enhances pancreatic cancer cell growth and associates with poor patient survival.  Oncotarget. 2016 Nov 29. doi: 10.18632/oncotarget.13704. [Epub ahead of print] PMID: 27911862. 
  • Ethan Poteet, Phoebe Lewis, Changyi Chen, Sam On Ho, Thai Do, SuMing Chiang, Celia Labranche, David Montefiori, Gary Fujii, Qizhi Yao. (2016).  Toll-like Receptor 3 Adjuvant in Combination with Virus-like Particles Elicit a Strong Humoral Response Against HIV Vaccine.  Vaccine, 2016 Nov 21;34(48):5886-5894. doi: 10.1016/j.vaccine.2016.10.036.
  • Vanaja Konduri, Dali Li, Matthew M. Halpert, Dan Liang, Zhengdong Liang, Yunyu Chen, William E. Fisher, Silke Paust, Jonathan M. Levitt, Qizhi Cathy Yao*, William K. Decker*. (2016).  Chemo-Immunotherapy Mediates Durable Cure of Orthotopic KrasG12D/p53-/- Pancreatic Ductal Adenocarcinoma.  OncoImmunology.  2016 Jul 22;5(9):e1213933 *Co-corresponding authors. PMID: 27757308.
  • Lü JM, Liang Z, Wang X, Gu J, Yao Q, Chen C.  (2016). New polymer of lactic-co-glycolic acid-modified polyethylenimine for nucleic acid delivery. Nanomedicine (Lond). 2016 Aug;11(15):1971-91. doi: 10.2217/nnm-2016-0128. Epub 2016 Jul 26. PMID: 27456396
  • Ethan Poteet, Phoebe Lewis, Changyi Chen, Sam On Ho, Thai Do, SuMing Chiang, Celia Labranche, David Montefiori, Gary Fujii, Qizhi Yao. (2016).  Toll-like Receptor 3 Adjuvant in Combination with Virus-like Particles Elicit a Strong Humoral Response Against HIV Vaccine.  Vaccine, 2016 Nov 21;34(48):5886-5894. doi: 10.1016/j.vaccine.2016.10.036.
  • Rios A, Pottet EC, Siwak EB, Anderson DW, Yao QC. (2016). The Human Immune Response to HIV and Its Impact in the Potential Development of an Inactivated HIV Vaccine.  AIDS Rev. 2016 Jul 19;18(3). [Epub ahead of print]. PMID: 27438575
  • Ethan Poteet, Phoebe Lewis, Feng Li, Sheng Zhang, Jianhua Gu, Changyi Chen, Sam On Ho, Thai Do, SuMing Chiang, Gary Fujii, Qizhi Yao. (2015). A novel prime and boost regimen of HIV virus-like particles with TLR4 Adjuvant MPLA induces Th1 oriented immune responses against HIV.  PlosOne. 10(8):e0136862. PMID: 26312747
  • Marin-Muller, C., Li, D., Bharadwaj, U., Li, M., Chen, C., Hodges, SH., Fisher, WE., Mo, Q., Hung, MC., Yao Q. (2013).  A Tumorigenic Factor Interactome Connected through Tumor Suppressor MicroRNA-198 in Human Pancreatic Cancer. Clinical Cancer Research, 19(21):5901-13.
  • Zhang, S, Yong, L, Li D, Cubas, R, Chen, C, Yao, Q. (2013),  Mesothelin virus-like particle immunization controls pancreatic cancer growth through CD8+ T cell induction and reduction in the frequency of CD4+foxp3+ICOS-regulatory T cells. PLoS One, 8(7):e68303.
  • Bharadwaj U, Marin-Muller C, Li M, Chen C, Yao Q. (2011), Mesothelin confers pancreatic cancer cell resistance to TNF-α-induced apoptosis through Akt/PI3K/NF-κB activation and IL-6/Mcl-1 overexpression.  Mol Cancer,  10:106.
  • Bharadwaj U, Marin-Muller C, Zhang Y, Li M, Chen C, Yao Q. (2011), Mesothelin overexpression promotes autocrine IL-6/sIL-6R trans-signaling to stimulate pancreatic cancer cell proliferation.  Carcinogenesis, 32(7):1013-1024.
  • Cubas R, Zhang S, Li M, Chen C, Yao Q. (2011),  Chimeric Trop2 virus-like particles: a potential immunotherapeutic approach against pancreatic cancer. J Immunother, 34(3):251-263.
  • Zhang S, Cubas R, Li M, Chen C, Yao Q. (2009),  Virus-like particle vaccine activates conventional B2 cells and promotes B cell differentiation to IgG2a producing plasma cells. Mol Immunol, 46(10):1988-2001.
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Virus-Like Particle Translational Oncology Laboratory

Baylor College of Medicine
One Baylor Plaza Houston, TX 77030
It’s all in the delivery – Antibodies improve nanoparticle delivery of therapeutic nucleic acids, image by Scott Holmes, CMI

In the News

Dr. Yao Awarded Roderick D. MacDonald Research Funding

It’s all in the delivery – Antibodies improve nanoparticle delivery of therapeutic nucleic acids

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