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  8. Confocal Microscopy and Image Analysis Core
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Confocal Microscopy and Image Analysis Core Instrumentation

main microscope room
Main microscope room

This is the main microscope room containing a Leica confocal, a Zeiss Axiophot, a Nikon SMZ1500 dissecting microscope and the Meyer Slide scanner.

Zeiss Axiophot microscope
Zeiss Axiophot microscope

The Zeiss Axiophot microscope is capable for bright field and epifluorescent imaging with both black and white, and color CCD cameras.

NeuN Staining from Zeiss microscope

Bright field imaging from the Zeiss microscope of brain sections stained with a neuronal marker to test for differences in brain structure among pre-mature baby pigs given different formulations of TPN.  These images were captured using a SPOT-SliderRT CCD camera.

Leica SME Laser Scanning Confocal Microscope
The Leica SME Laser Scanning Confocal Microscope

The Leica SME Laser Scanning Confocal Microscope images 4 channels with excitation wavelengths of 405, 488, 563, and 633 nm.  Channels are sequentially imaged using a tunable emission filter.  The system is capable of automated tiling for multiple fields or image stacks as well as collection of time series data. 

This scope has a fully motorized stage, which facilitates both the image tiling functions as well as the automated collection of z-stacks. Image brightness, background intensity, and focal plane, are all controlled through a digital console behind the keyboard. 

This scope is integrated into an image analysis workstation that consists of a DELL Optiplex GX620 processor with a Radeon X600SE video card, Adobe Photoshop image processing software and ImagePro 10.0 image  analysis software. The image analysis software consists of a basic analysis module with plug-in modules for image deconvolution (Sharp Stack Plus Ver 5.0), and 3 dimensional reconstruction (3D Constructor).

Nikon SMZ 1500 dissecting microscope
Nikon SMZ 1500 dissecting microscope

The Nikon SMZ 1500 dissecting microscope is capable of imaging bright-field and fluorescent specimens from 70x to 150x.  The scope also has flexible top illumination to facilitate microdissections. 

Meyer Slide scanner

Meyer Slide scanner quickly collects images of stained tissues sections allowing a global view of tissue architecture.  

Olympus Fluoview confocal microscopy system
Olympus Fluoview confocal microscopy system

Olympus Fluoview confocal microscopy system consisting of an IX70 microscope, four lasers (blue diode, argon, green HeNe, and red HeNe) a laser combiner and FV300 confocal scanner, a bright-field detector, a Spot RT color CCD camera, a computer work station, and a Kodak 8600 dye-sublimation printer

Stained brain cells using Leica SME microscope
Brain tissue imaged using the Olympus Fluoview confocal microscope shows cell nuclei stained with DAPI staining in blue alongside fluorescence in-situ hybridisation for Agrp and BMP7.
Leica microtome
Leica microtome

The Leica microtome is available by reservation to any user wishing to cut their own paraffin sections.

Questions

Questions concerning suitability of the system for particular applications can be directed to Dr. Yongjie Yang associate professor Pediatrics and Molecular and Cellular Biology.

Confocal Microscopy and Image Analysis Core
  • Instrumentation
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Director: Yongjie Yang, Ph.D.

Email yongjiey@bcm.edu

Confocal Microscopy and Image Analysis Core

Children's Nutrition Research Center
1100 Bates St. Room: CNRC-10072 Houston, TX 77030

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