Research

Genomic and RNA Profiling Core

Master
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Illumina iSeq 100 Sequencer
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New Illumina iSeq 100 Sequencer Installed

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Our new low-throughput sequencer is ideally suited to run small projects such as pilot studies and target captures, and can be used to evaluate library quality and yield before large NovaSeq runs.

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Whole Genome Bisulfite Sequencing
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New Service: Whole Genome Bisulfite Sequencing

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One-stop workflow. Submit your genomic DNA; we will take care of bisulfite conversion, library prep and sequencing. More information and performance data in our ABRF poster presentation.

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About the Core

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The Genomic and RNA Profiling Core (GARP) provides access to state-of-the-art genomic profiling technology and services, including:

  • Sequencing only- Standalone sequencing of user-prepped samples as opposed to samples that go through library prep and sequencing in house.
  • Library prep
  • Next Gen Sequencing on our Illumina platforms (iSeq 100, NextSeq 500 and NovaSeq 6000)
  • Nanostring nCounter Technology
  • Sample Quality Control
  • Nucleic acid shearing on the Covaris
  • DNA size selection on the Pippin HT
  • Consultation
  • Primary Data Processing & Analysis
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We provide a secure web-based online environment for service requests, sample tracking, data management and billing in our LIM system: GSLE

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Core Resource

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Information for Acknowledgement of Cores in Publications

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Core name: Genomic & RNA Profiling Core
Personnel: Lisa D. White, Ph.D., Academic Director, Daniel C. Kraushaar, Ph.D., Technical Director, Rene Stalnaker, Md Habibul Islam, Ornella Tuekam, Emily Ricco, Research Staff
Grants supporting the core: P30 Digestive Disease Center Support Grant (NIDDK-DK56338) and P30 Cancer Center Support Grant (NCI-CA125123), NIH S10 grant (1S10OD02346901).

The associated centers should adhere to these additional acknowledgement instructions.

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