Metagenomic and Metatranscriptomic Analysis

  • Microbial diversity and relative abundances
  • Functional diversity

Bacterial Genomes

  • Sequencing
  • Assembly
  • Annotation
  • Comparative genomics

Clinical Metadata Analysis

  • Connecting clinical variables to shifts in microbiome structure and function

Informatics, Tools, and Software

  • Evaluation and implementation of tools and software for large scale sequence analysis projects
  • Development of novel analysis and visualization methods
  • Data storage and archiving