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  1. Baylor College of Medicine
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  4. Alkek Center for Metagenomics and Microbiome Research
  5. CMMR Sequencing Center
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CMMR Sequencing Center

Precision Microbiome Solutions - CMMR, Where Science Meets Innovation

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About Us

The CMMR Sequencing Center, part of Baylor College of Medicine’s Alkek Center for Metagenomics and Microbiome Research, has been a key hub for translational microbiome research since 2011. Located in the Texas Medical Center, it provides expertise in study design, sample processing, metagenomic sequencing, and analytical tool development. Partnering with over 300 global research groups on more than 1,000 projects, the center addresses diverse analytical challenges across various sample types. During the COVID-19 pandemic, it processed over 163,000 testing samples for Houston and Harris County. Since 2022, it has partnered with the Texas Epidemic Public Health Institute’s TexWEB network, developing sequencing pipelines to monitor microbial threats in Texas wastewater. The CMMR’s mission is to lead microbiome research, advancing health through innovative therapeutics and diagnostics.

Top 5 Reasons to Choose CMMR for Your Microbiome Research

  • Seamless End-to-End Solutions: From brilliant experimental design to stunning final reports, CMMR has you covered. We tackle diverse sample types, complex research questions, and unique study designs with ease—delivering robust data, insightful bioinformatics, and stunning visualizations. Powered by cutting-edge tech, we handle the details so you can focus on groundbreaking discoveries!
  • Cutting-Edge Technology: Step into the future with CMMR’s state-of-the-art facility! Our high-throughput automated platforms for nucleic acid extraction, next-gen sequencing tools (Illumina, Oxford Nanopore), and a 2025-upgraded high-performance computing cluster with Intel-based nodes and GPU-optimized systems make us a metagenomic powerhouse. Your research deserves the best—CMMR delivers.
  • Unmatched Expertise You Can Trust: Your success is our focus. Partnering with 300+ research groups globally, more than 500 collaborators, and involvement in over 1,000 projects. We bring unmatched experience to the table. Our team brings over 85 years of combined microbiome expertise. Whether it’s 16S sequencing, metagenomics, qPCR, or virome capture, we’ve got you covered with proven skills and continuously updated methods.
  • Versatile Pipelines for Every Need: From human microbiomes to environmental samples, CMMR’s inclusive workflows adapt to any challenge. Specializing in large cohort studies, we offer everything from basic taxonomic profiling to in-depth functional analysis. Whatever your project demands, our diverse capabilities deliver.
  • Affordable Flexibility, Premium Quality: Backed by Baylor College of Medicine, CMMR combines cost-effective, tailored services with uncompromising excellence. We optimize your budget and timeline without sacrificing precision—making high-quality microbiome research accessible and efficient for you.
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Our Services

View Our Services
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Our Facilities

View Our Facilities

Our BCM Collaborators

  • Britton Therapeutic Facility
  • Gnotobiotics Core (Germ Free Facility)
  • Human Genome Sequencing Center
  • Immunology & Microbiology Graduate Program
  • Texas Medical Center Digestive Diseases Center
  • Gulf Coast Center for Precision Environmental Health
  • TAILOR PHAGE Research Center
  • 3D Organoid Core

Our Non-BCM Collaborators

  • UT Health
  • MD Anderson
  • Harvard University
  • General Mass Hospital
  • Dana-Farber Cancer Institute
  • University of South Florida
  • Texas Epidemic Public Health Institute
  • University of California, Los Angeles

Publications

Our research projects and studies result in publications in PubMed and other scientific journals. 

View Publications
Alkek Center for Metagenomics and Microbiome Research
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Request More Information

Email cmmr.info@bcm.edu

CMMR Sequencing Center

Dynamic One Building 1840 Dynamic Way Houston, TX 77030

Our Team

CMMR Executive Leadership
Joseph F. Petrosino, Ph.D.
Executive Director
Chairman/Professor

Sara Joan Javornik Cregeen, Ph.D.
Director of Project Management and Bioinformatics
Assistant Professor

Matthew Clyton Ross, Ph.D.
Director of Sequencing and Extraction Laboratories, Research Development and Quality Assurance Control
Assistant Professor

Project Management
Tasha Santiago Rodriguez, Ph.D.
Instructor

Shelby Rosa Simar, Ph.D.
Instructor

Juwan Cormier, B.S.
Senior Research Operations Coordinator

Bioinformatic and Data Analysis
Anil Surathu, M.S.
Senior Bioinformatics Analyst

Jacqueline Karie Tempest Zorz, Ph.D.
Instructor

Extraction Laboratory
Tulin Ayvaz, M.S.
Laboratory Director

Sequencing Laboratory   
Marissa Minor, Ph.D.
Laboratory Manager

Research and Development
Tushar Suvra Bhowmick, Ph.D.
Assistant Laboratory Director

Quality Assurance and Control
Gale Rubio Mandapat, B.S.
Senior Quality Assurance and Control associate

Administration  
Lujia Hu, M.B.A.
Research Operations Manager

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