XIN LI, PhD
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XIN LI, PhD
Assistant Professor
Positions
- Assistant Professor
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Biochemistry and Molecular Pharmacology
Baylor College of Medicine
Houston, Texas United States
- Associate member
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Baylor College of Medicine
Dan L Duncan Comprehensive Cancer Center
Houston, Texas United States
Addresses
- Baylor College of Medicine (Office)
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1 Baylor Plaza
Alkek building, N510
Houston, TX 77030
United States
Education
- Postdoctoral Fellowship at Baylor College of Medicine
- 04/2023 - Houston, Texas United States
- Postdoctoral Fellowship at University of Houston
- 09/2019 - Houston, Texas United States
- Postdoctoral Fellowship at Texas Tech University Health Sciences Center
- 09/2017 - Amarillo, Texas United States
- PhD from Shandong University
- 06/2016 - Jinan, China
Professional Interests
- Drug Discovery, Medicinal Chemistry and Chemical Biology
Professional Statement
I am interested in the discovery and development of small-molecule inhibitors that selectively target biologically important proteins to dissect fundamental biological processes (chemical biology) and develop novel therapeutics (drug discovery).I have received comprehensive academic training in medicinal chemistry and drug discovery. My training encompasses rational and computer-aided drug design, organic synthesis, and studies of drug evaluation and mechanisms of action. I have experience with a wide range of techniques, including recombinant protein expression and purification, biochemical assays (e.g., UV/fluorescence-based assays, AlphaScreen, ITC, and BLI), cellular assays, gene expression analysis, and in vivo studies.
I have over 10 years of wet-lab research experience in medicinal chemistry and drug discovery, with a track record of discovering and developing multiple classes of protein inhibitors and degraders in anti-infective and anticancer research. I have published approximately 40 peer-reviewed articles in journals including Journal of Hematology & Oncology, Theranostics, and Journal of Medicinal Chemistry.
These academic training and research experiences have provided me with a strong background in the discovery and development of novel chemical probes or drug leads, which could be used for the fundamental biology study or for the further drug development.
Websites
Selected Publications
- Xin Li, Yuan Yao, Fangrui Wu, Yongcheng Song "A proteolysis-targeting chimera molecule selectively degrades ENL and inhibits malignant gene expression and tumor growth." J Hematol Oncol. 2022 Apr 8;2022(15):41. Pubmed PMID: 35395864
- Md Ashraf-Uz-Zaman #, Xin Li #, Yuan Yao #, Chandra Bhushan Mishra, Bala Krishna Moku, and Yongcheng Song "Quinazolinone Compounds Have Potent Antiviral Activity against Zika and Dengue Virus." J Med Chem. 2023 Jul 28; Pubmed PMID: 37506506
- Xin Li, Yongcheng Song "Proteolysis-targeting chimera (PROTAC) for targeted protein degradation and cancer therapy." J Hematol Oncol. 2020 May 13;13:50. Pubmed PMID: 32404196
- Xin Li, Yongcheng Song "Structure, function and inhibition of critical protein–protein interactions involving mixed lineage leukemia 1 and its fusion oncoproteins." J Hematol Oncol. 2021 Apr 6;14(1):56. Pubmed PMID: 33823889
- Xin Li #, Yongcheng Song # "Structure and function of SARS-CoV and SARS-CoV-2 main proteases and their inhibition: A comprehensive review." Eur J Med Chem. 2023 Aug 31;260:115772. Pubmed PMID: 37659195
- Shenyou Nie*, Fangrui Wu*, Jingyu Wu*, Xin Li*, Chao Zhou, Yuan Yao, Yongcheng Song "Structure-activity relationship and antitumor activity of 1, 4-pyrazine-containing inhibitors of histone acetyltransferases P300/CBP." Eur J Med Chem. 2022;237(5):114407. Pubmed PMID: 35512565
- Fangrui Wu, Shenyou Nie, Yuan Yao, Tong Huo, Xin Li, Xiaowei Wu, Jidong Zhao, Yi-Lun Lin, Yinjie Zhang, Qianxing Mo, Yongcheng Song "Small-molecule inhibitor of AF9/ENL-DOT1L/AF4/AFF4 interactions suppresses malignant gene expression and tumor growth." Theranostics. 2021;11(17):8172-8184. Pubmed PMID: 34373735
- Shenyou Nie, Jidong Zhao, Xiaowei Wu, Yuan Yao, Fangrui Wu, Yi-Lun Lin, Xin Li, Alexander R Kneubehl, Megan B Vogt, Rebecca Rico-Hesse, Yongcheng Song "Synthesis, structure-activity relationship and antiviral activity of indole-containing inhibitors of Flavivirus NS2B-NS3 protease." Eur J Med Chem. 2021 Nov 5;225:113767. Pubmed PMID: 34450494
- Xin Li *, Xiaowei Wu *, Shenyou Nie, Jidong Zhao, Yuan Yao, Fangrui Wu, Chandra Bhushan Mishra, Md Ashraf-Uz-Zaman, Bala Krishna Moku, Yongcheng Song "Discovery, Structure–Activity Relationship and In Vitro Anticancer Activity of Small-Molecule Inhibitors of the Protein–Protein Interactions between AF9/ENL and AF4 or DOT1L." Cancers. 2023 Nov 3;15(21):5283. Pubmed PMID: 37958457
- Xin Li #, Yongcheng Song # "Targeting SARS-CoV-2 nonstructural protein 3: function, structure, inhibition, and perspective in drug discovery." Drug Discov Today. 2023 Nov 15;29(1):103832. Pubmed PMID: 37977285
- Md Ashraf-Uz-Zaman *, Teck Khiang Chua *, Xin Li *, Yuan Yao, Bala Krishna Moku, Chandra Bhushan Mishra, Vasanthi Avadhanula, Pedro A. Piedra, and Yongcheng Song "Design, Synthesis, X-ray Crystallography, and Biological Activities of Covalent, Non-Peptidic Inhibitors of SARS-CoV-2 Main Protease." ACS Infect Dis. 2024 Jan 8;10(2):715-731. Pubmed PMID: 38192109
- Xin Li #, Yongcheng Song # "Perspective for Drug Discovery Targeting SARS Coronavirus Methyltransferases: Function, Structure and Inhibition." J Med Chem. 2024 Nov 14;67(21):18642-18655. Pubmed PMID: 39478665
- Chandra Bhushan Mishra*, Xin Li*, Bala Krishna Moku, Sehun Kwak, Dnyaneshwar N Garad, Yongcheng Song "Synthesis, Structure–Activity Relationships, and Antitumor Activities of Quinoxiline-Containing Inhibitors of the Protein–Protein Interactions between Transcription Coactivator AF9/ENL and DOT1L/AF4." J Med Chem. 2025 Sep 16;68(18):19396. Pubmed PMID: 40957087
- Dnyaneshwar N Garad*, Xin Li*, Teck Khiang Chua*, Bala Krishna Moku, Chandra Bhushan Mishra, Yongcheng Song "Targeting the S1′ Pocket of SARS-CoV-2 Papain-Like Protease Yields Highly Potent Inhibitors." ACS Med Chem Lett. 2025 Oct 30;16(11):2280. Pubmed PMID: 41256988
Projects
- Medicinal Chemistry and Anticancer Drug Discovery
- Medicinal Chemistry and Antiviral Drug Discovery
Funding
- SynthX/Duncan Cancer Center Seed Award Grant funding from SynthX Center and the Duncan Cancer Center
Skills
- Rational and Computer-Aided Drug Design
- Docking, Molecular Modeling, Virtual Screening
- Synthetic Medicinal Chemistry
- Mechanism of Action Studies
- Drug Characterization In Vitro and In Vivo
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