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Physio - Larina Lab

Houston, Texas

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Physio - Larina Lab
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Selected Publications

Book Chapters and Invited Reviews

1. Andrew L. Lopez III, Monica D. Garcia, Mary E. Dickinson and Irina V. Larina. “Live confocal microscopy of the developing mouse embryonic yolk sac vasculature” in the “Vascular Morphogenesis" edited by Domenico Ribatti, Humana Press, submitted.

2. Monica D. Garcia, Andrew L. Lopez III, Kirill V. Larin and Irina V. Larina. “Imaging of cardiovascular development in mammalian embryos using optical coherence tomography” in the “Vascular Morphogenesis" edited by Domenico Ribatti, Humana Press, submitted.

3. Irina V. Larina and Mary E. Dickinson. “In vivo Imaging of the developing mouse embryonic vasculature” in the "In Vivo Cellular Imaging Using Fluorescent Proteins" edited by Robert Hoffman, Humana Press, 2012.

4. Irina V. Larina, Mary Dickinson, and Kirill Larin. “Fluorescence and OCT imaging of microcirculation in early mammalian embryos” in the “Microcirculation Imaging” edited by Martin Leahy, Wiley-VCH, 2012.

5. Irina V. Larina, Kirill V. Larin, Monica J. Justice, and Mary E. Dickinson. “Optical Coherence Tomography for live imaging of mammalian development”, Current Opinion in Genetics & Development, vol. 21(5): 579–584, 2011.

6. Irina V. Larina, Monica D. Garcia, Tegy J. Vadakkan, Kirill Larin, and Mary Dickinson. “Imaging Mouse Embryonic Cardiac Function” in the “Imaging in Developmental Biology: A Laboratory Manual”, Cold Spring Harbor Laboratory Press, 2011.

7. Irina V. Larina, Mary Dickinson, and Kirill Larin. “Advanced Optical Imaging of Early Mammalian Embryonic Development” in the “Handbook of Photonics for Biomedical Science” edited by Valery Tuchin, Taylor & Francis Group, 2010.

8. Irina V. Larina and Mary E. Dickinson. “Multiphoton Imaging of Animal Development”, in the "Handbook of Biological Nonlinear Optical Microscopy" edited by Barry Masters and Peter So, Oxford University Press, 2008.

Articles

1. Brandi N Baird, Mark J Schliekelman, Young-Ho Ahn, Yulong Chen, Jonathon D Roybal, Bartley J Gill, Dhruva K Mishra, Baruch Erez, Michael O'Reilly, Yanan Yang, Mayuri Patel, Xin Liu, Nishan Thilaganathan, Irina V Larina, Mary E Dickinson, Jennifer L West, Don L Gibbons, Diane D Liu, Min P Kim, John M Hicks, Ignacio I Wistuba, Samir M Hanash, Jonathan M Kurie, “Fibulin-2 is a driver of malignant progression in lung adenocarcinoma”, PLoS ONE, 8(6); e67054, 2013.

2. Sandeep Bhat, Irina V. Larina, Kirill V. Larin, Mary E. Dickinson, and Michael Liebling, “4D Reconstruction of the Beating Embryonic Heart From Two Orthogonal Sets of Parallel Optical Coherence Tomography Slice-Sequences”, IEEE Transactions on Medical Imaging, 32(3):578-88, 2013.

3. Irina V. Larina, Saba H. Syed, Narendran Sudheendran, Paul A. Overbeek, Mary E. Dickinson, and Kirill V. Larin, “Optical Coherence Tomography for live phenotypic analysis of embryonic ocular structures in mouse models”, Journal of Biomedical Optics, 17(8), 081410, 2012.

4. Irina V. Larina, Kirill V. Larin, Mary E. Dickinson, and Michael Liebling, “Sequential Turning Acquisition and Reconstruction (STAR) method for four-dimensional imaging of cyclically moving structures”, Biomedical Optics Express, 3(3); 650-660, 2012.

5. Irina V. Larina, Monica D. Garcia, Tegy J. Vadakkan, Kirill V. Larin, and Mary E. Dickinson, “Imaging Mouse Embryonic Cardiovascular Development”, Cold Spring Harb Protoc; 2012(10): pdb.top071498.

6. Irina V. Larina and Mary E. Dickinson. “In vivo Imaging of the developing mouse embryonic vasculature” Methods in Molecular Biology, 872: 205-215, 2012.

7. Saba H. Syed, Kirill V. Larin, Mary E. Dickinson, and Irina V. Larina, “Optical Coherence Tomography for high resolution imaging of mouse development in utero”, Journal of Biomedical Optics, 16(4), pp. 046004-6, 2011.

8. Irina V. Larina, Kirill V. Larin, Monica J. Justice, and Mary E. Dickinson. “Optical Coherence Tomography for live imaging of mammalian development”, Current Opinion in Genetics & Development, vol. 21(5): 579–584, 2011.

9. JeaBuem Yoo, Irina V. Larina, Kirill V. Larin, Mary E. Dickinson, and Michael Liebling, “Increasing the field-of-view of dynamic cardiac OCT via post-acquisition mosaicing without affecting frame-rate or spatial resolution”, Biomedical Optics Express
Vol. 2(9), pp. 2614, 2011.

10. Narendran Sudheendran, Saba H. Syed, Mary E. Dickinson, Irina V. Larina, and Kirill V. Larin, “Speckle variance OCT imaging of the vasculature in live mammalian embryos”, Laser Physics Letters, Vol. 8, pp. 247, 2011.

11. John J. Armstrong, Irina V. Larina, Mary E. Dickinson, Warren E. Zimmer, and Karen K. Hirschi. “Characterization of Bacterial Artificial Chromosome Transgenic Mice Expressing mCherry Fluorescent Protein Substituted for the Murine Smooth Muscle a-Actin Gene”, Genesis, 48(7):457-63, 2010.

12. Sandeep Bhat, Irina V. Larina, Kirill V. Larin, Mary E. Dickinson, and Michael Liebling, “Multiple-Cardiac-Cycle Noise Reduction in Dynamic Optical Coherence Tomography of the Embryonic Heart and Vasculature”, Optics Letters, 34 (23): 3704-6, 2009.

13. Irina V. Larina, Kenryo Furushima, Mary E. Dickinson, Richard R. Behringer, and Kirill V. Larin, ”Live Imaging of Rat Embryos with Doppler Swept Source Optical Coherence Tomography”, Journal of Biomedical Optics, 14(5), 2009.

14. Kirill V. Larin, Irina V. Larina, Michael Liebling, and Mary E. Dickinson, “Live Imaging of Early Developmental Processes in Mammalian Embryos with Optical Coherence Tomography”, Journal of Innovative Optical Health Sciences, 2(3): 253-9, 2009.

15. Irina V. Larina, Steven Ivers, Saba Syed, Mary E. Dickinson, and Kirill V. Larin, “Hemodynamic measurements from individual blood cells in early mammalian embryos with Doppler swept source OCT”, Optics Letters, 34(7): 986-8, 2009.

16. Ross A Poché, Irina V. Larina, Melissa L Scott, Jennifer E Saik, Jennifer L West, and Mary E. Dickinson, “The Flk1-myr::mCherry mouse as a useful reporter to characterize multiple aspects of ocular blood vessel development and disease”, Developmental Dynamics, 2009.

17. Irina V. Larina, Wei Shen, Olivia G. Kelly, Anna-Katerina Hadjantonakis, Margaret H. Baron, and Mary E. Dickinson. “A membrane associated mCherry fluorescent reporter line for studying vascular remodeling and cardiac function during murine embryonic development”, Anatomical Record, 292(3):333-41, 2009.

18. Irina V. Larina, Narendran Sudheendran, Mohamad Ghosn, J. Yi Jiang, Alex Cable, Kirill Larin, and Mary Dickinson. “Live Imaging of Blood Flow in Mammalian Embryos Using Doppler Swept Source Optical Coherence Tomography”, Journal of Biomedical Optics Letters, 13(6):060506, 2008.

19. Irina V. Larina, Esteban F. Carbajal, Valery V. Tuchin, Mary E. Dickinson, and Kirill V. Larin “Optical clearing of mouse embryonic tissue for OCT imaging”, Laser Physics Letters, Vol. 5, pp. 476-480, 2008.

20. Irina V. Larina, B. Mark Evers, Rinat O. Esenaliev. “Optimal Drug and Gene Delivery in Cancer Cells by Ultrasound-Induced Cavitation”, Anticancer Research, Vol. 25, pp. 149-156, 2005.

21. Irina V. Larina, B. Mark Evers, Taras V. Ashitkov, Christian Bartels, Kirill V. Larin, Rinat O. Esenaliev. “Enhancement of drug delivery in tumors by using interaction of nanoparticles with ultrasound radiation”, Technology in Cancer Research and Treatment, Vol. 4, No. 2, pp. 217-226, 2005 (This article is featured in the NCI Alliance for Nanotechnology in Cancer website).

22. Irina V. Larina, Kirill Larin, Rinat O. Esenaliev.Real-time optoacoustic monitoring of temperature in tissues”, Journal of Physics D: Applied Physics, 2005.

23. Kirill Larin, Irina V. Larina, Rinat O. Esenaliev.Monitoring of Tissue Coagulation during Thermotherapy using Optoacoustic Technique”, Journal of Physics D: Applied Physics, 2005.

24. Rinat O. Esenaliev, Irina V. Larina, Kirill V. Larin, Donald J. Deyo, Massoud Motamedi, D. S. Prough, “Optoacoustic technique for non-invasive monitoring of blood oxygenation: studies in vitro”, Applied Optics, Vol. 41, No. 22, pp. 4722-4731, 2002.

25. Kirill V. Larin, Irina V. Larina, Massoud Motamedi, Rinat O. Esenaliev, “Optoacoustic laser monitoring of cooling and freezing of tissues”, Quantum Electronics, 32(11), pp. 953-958, 2002.

26. Rinat O. Esenaliev, Kirill V. Larin, Irina V. Larina, Massoud Motamedi, “Noninvasive monitoring of glucose concentration with optical coherent tomography”, Optics Letters, Vol. 26, Issue 13, p.992-994, 2001.

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